I need a software programmer dealing with python to work in medical image processing( 3D reconstruction and segmentation)

CANCER 3D Modeling from 2D DICOM Images


I am a student in a university with a health background and some basic information in Python. I am working in a cancer visualization and extraction project and looking for an experienced software programmer using python and have experience in medical imaging as DICOM images (digital imaging and communication in medicine).This project continues for one month and through it I want the programmer to make 3D reconstruction from 2D DICOM images. The program also makes extraction and segmentation of the tumor tissue from the background and segmentation of other tissues. Then it renders the 3D model of the extracted tumor.

We need to use different kinds of algorithms as marching cube algorithm including interpolation and approximation for 3D reconstruction. Developer may use segmentation algorithms as K-means, region growing, threshold and the likes.

I already started the work and I have online resources for DICOM images, I performed some scripts related to this work and downloaded some open-source of DICOM images software processing images as 3D slicer and imageJ. All of these I will provide the programmer to start his/her work.

Program Requirements

A program is needed to be written in Python. It will do the following:

1. Read sequence of DICOM .DCM images (2D) and render them in sequence and the sequence can be controlled with the mouse back and forth. (Already completed)

2. Segmenting and analyzing the 2D DICOM images and separate areas that are likely to be cancer (We will give the programmer some algorithms recommendations as well as the density that are likely to be cancer), separate cancer areas in new sequence of DICOM images, example:

a. Original DICOM images ([login to view URL], [login to view URL], [login to view URL], [login to view URL], [login to view URL], [login to view URL], [login to view URL], [login to view URL], [login to view URL], [login to view URL], [login to view URL], [login to view URL]).

b. The DICOM that contains cancer would be: ([login to view URL], [login to view URL], [login to view URL], [login to view URL], [login to view URL]).

c. The following requirement in number (3), it will build the 3D model from the cancer DICOM images in (b) above.

3. Then build a 3D construction from the DICOM sequence. The 3D model should be controlled with degrees of depth (From skin to the deepest structure). (Completed partly)

Figure 1: (2D DICOM image) Shows cancer in blue circle, the cancer can be analyzed according to several algorithms, some of them consider the brightness, some the circular shape, and some the density. The developer can use any algorithm that sees fits, to determine the cancer area in DICOM images.

Квалификация: 3D-рендеринг, Machine Learning (ML), Matlab and Mathematica, Медицина, Python

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О работодателе:
( 72 отзыв(-а, -ов) ) Rawalpindi, Pakistan

ID проекта: #11653495

7 фрилансеров(-а) в среднем готовы выполнить эту работу за $230


HI I have experience of working with medical images. cancer segmentation and classifications task was completed earlier for MRI images. I will provide you to model 3D cancer images in python within very less time pe Больше

$272 USD за 3 дней(-я)
(50 отзывов(-а))
$252 USD за 3 дней(-я)
(16 отзывов(-а))

A proposal has not yet been provided

$222 USD за 100 дней(-я)
(2 отзывов(-а))

Dear sir I have completed six projects. I suggest using matlab. regards

$333 USD за 30 дней(-я)
(0 отзывов(-а))

Hello, I'm not so experienced programmer but Your project is very interesting for me. Could you make available your code (maybe github or another hosting repository)? Maybe I will be able to contribute something to Y Больше

$222 USD за 30 дней(-я)
(0 отзывов(-а))

Hello, I can do this project. I am expert in Matlab. I have done no of project on Matlab. Please open your chat box for more discussion. Area of Interest: Image Processing, Speech & Pattern reorganization, Signal Pro Больше

$155 USD за 3 дней(-я)
(0 отзывов(-а))

I did my PhD and my postdoc writing programs for medical imaging analysis. I'm out of work right now so yours would be my #1 project. I would love to get back to doing what I'm trained to do and would give good attenti Больше

$155 USD за 10 дней(-я)
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